CDS

Accession Number TCMCG005C32380
gbkey CDS
Protein Id XP_020245714.1
Location join(37741789..37741854,37741933..37742052,37742963..37743120,37744986..37745030,37746697..37746775,37746847..37746920,37747809..37747915,37748930..37749112,37750041..37750244,37750408..37750615,37750926..37750997,37751091..37751440,37751524..37751716,37751814..37752066,37752211..37752547,37753232..37753412,37753549..37753689,37753842..37754103,37754219..37754632,37758750..37758973,37759043..37759285,37762667..37762803,37762982..37763163,37763257..37763682,37763757..37763882,37763992..37764057,37764433..37764816,37764957..37766383,37766469..37766748,37767658..37767891,37775014..37775571,37775803..37775935,37776203..37776459)
Gene LOC109823755
GeneID 109823755
Organism Asparagus officinalis

Protein

Length 2707aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020390125.1
Definition small subunit processome component 20 homolog

EGGNOG-MAPPER Annotation

COG_category V
Description Down-regulated in metastasis
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACTTCAAGGTTGCAGTCCGTGAAGTGCCTGGATACTTCCTCAGGCCCAAAGCGATTCACTTTCAAGAGCATCTCCCAGAGAATCAAAGAAATCGACATCAATGTCTACAAGAGCCTCGACCCCTTGAGGTCCGAGCCCAAAAGCTCCTCCTTTTTCCTCGACAGTCTTTTGTATTGGCGAGAACTGAACACCGCAGAGGACTTCATCTCGTTTTATGAGGAGATGATGCCTTTAGTCCAGACGATGCCGCAAATTTTATTCCACAAGGATAAAATTTTCTCCGAGCTTATCCGGAGAGTGAACATGAAAGCGCAGTTGTCCCTCGAACCGATACTGATGTTAATAGCTAGTCTATCAAGAGATATCCTAGAAGAGTTCTTACCGTTTCTGCAAAGGCTTACAGATTGTGTGGTCAATCTCCTCACAAATGGTGGTCGTTATCATCCAAACATCCTTGAGCAGGTCTTTACATCTTGGCAATATATAATGATGTATCTCCAAAAATACCTTGTCAAGGATGTCGTTGATGTCCTGAAGATTACAACCCGATTAAGATATTTTGAAAATGACCATGTGCCAGACTTCATGGCTGAAGCTGTCTCATTTTTGCTGAGAAACTCGTCAGTTATGGAACTTAAAAAAGGTCTGAGAATGATAGTCCTAGAAGTTGCAGAAAGTCCATCTGCAATTAAGAAGCGTGGGGCAACTGCTTTGCTGTTTTATGTTCTCAAAGGAACTTCTTCAAGACTTCATTCAAGAGCTGAGAAAGTATTTCGGTGGTTGATTGACAAATCTTTCCTCAGCCTCAGTGATGAATCCCTGGAAGGTTTGGAAGCTGTTCTTGAGGTTTCCAGTGATGTTATTAAAAGACTATTCAAGGAGGTTGACCCTACAGAGTTTGGTATGGTTTATAAATGCTTATATGAGGAAACATCCAGCTCCATAAATGATGGTTGCTTGATGCATCTTAATCGCTTGCTATCTCTTCTTACTACTACTATTTACCAGTCTAACAATACTCAAATCTATGATAGCGAAACATTGCTTGAACTTGTCAGATTGCTTATACGGTCATACATTGTGCCTGTTGAGAATATGAAGTCAGAAGAGCATTTTTCTCAAGTCCTTAATGGGATTTTAGAGTTGACACTATGCCTTCTGGACAATCCTCTCATTTCAGACGATTTGTCAAGCATTTCTCTGGATTATGCACCTGTATTCAGGTTGAAAAATTCAGGGCTATCATTTGTAAACAGGCTTCTTCTAAAGAATCCATGTGTTGTACATGCCTTCAGACATCACATTATAAGCGCAATGGCTAATTTAATTGAAGAATCACCAGAAGTGGTCCTTTTTTCAATTATTAAGTTCATTGAAGGACAGGAAAAGCTGCAACCTTTCAATAGCCTAGCTGGAATACCATCTGAAGAAATGTTAAAATTATGCAATTATTTTAAGAAGATTCTCTTTTTTTGGGTCAAGCTTTTAGGTCGCTGTACAACAGATAACAGTCTGTCTGATGCACCAGTTACTATATCCAATGTGGCTGTGCTGTGGGGAGTCCTTAGCTGCTATCCTCATTTTCAGCATTTACATGACAATGTGTCACCAATTATCGATCTAATTGTCGCTTTTGATCAAGTTCTGGAAACTGAGGCTGACAACATTGCAGGCATTCCAAAGTCTACATGGCAGAGTCTTCTTGGTGCTGCATTGATTTCTTATCATAAACTGCTATTGGTTACAAAAACAGGCCTTTCAGAAATAAGCACATTTCTGCGCCTAGCTAAGAGATACAAGTCTTCTTCACAAGTATTATTTGCCGTAGCTGAATTTTTGGATTCATTTATTGGTGGTATTTCAAAATCTGAAGCACATGCCTCCCAGAACATTCGTGATCTTGATACCAATGAAGCCGTGATCGCAACTAATATATTTTCAGATAATTTATCTCTTCCAAATAAGGAAATTCGCATGTCAACACTGAGGATTTTATCCCATTATCCTCCTTTAGGTGCACCATCGGCAACAAGTTATGAGCCCCCTCATAAGAAACTAAAAACAGAAGAATCCGGTTCATGCAGTGAACTCTCCCCAAGCAGTAATGTTGTTGACCTTCTTCTTTTGGTTGAGGCAACTCCTCTTTCAATATCTTCAAGTAGAAAAATTGTAAACCTCATTTCCAGGCTGCAGAAGGGACTCTCTTCCGCAAGAGTTAATCACGCGTACTTACCTCTTGTTTTAAATGGACTAATTGGTACATTACATAATAGATTGAGTTACCTATGGCAGCCAGCATCAGAGTGTCTGGCTGTTCTACTAGGAAGATACAAGGATCTTGTTTGGAATAAATTTGTTCAGCATTTGGAAAATTATCAGTTGAGATTTCTATCCTCGAGTGATGAGTTGGTGAAAATAAATTCAGAAAGTCCACAAGAAAAGAATCTAGTTGACTGCTTTAAACTGTTCCTGGCTCCTGATTTCGATAACACACCATGTGTGACAGTGATTAATCAATTTCTCAAGTCACTCCAAGAAGTCCATGACCTTGCAGAGTCTAGGTCTCGACAATTAATTCCATTGTTCTTGAAATTTTTGGGTTATGCTGATGATAGTCGTTCAAGTGTTGAAGCATTTAGCGGCCACAGTTGTTCAGGGAAGCAGTGGAGGTTGGTCCTCAAGGAATGGTTGAACTTATTGAAATCAATGCGTGATGTTCGATCTTTATACCAAAGCCAATTTCTTAAGGAAGTTTTGTCAAACAGGCTTCTAGGTGAAATTGATTCTGATATACAATTGAAGGTTTTGGAATGTTTGCTGAACTGGAAGGATGAATTTCTAACCCCATATGGTCAGCATCTTAAAAACCTGATTATTTCAAAAAACCTTCGTGAGGAGCTTGCTGTATGGTCTGCTTCAAAAGATTCTCAATGTATTCAAGAGTGCCACAGGGGTCCCATGATTCCTATACTTATCCGATTGCTAACACCGAAAGTCAGGAACTTAAAAACACTTGGGTCGTGTAAGCATACAGGTGTTAGTCATCGAAGGGCAGTTCTTTGTTTCTTAGCACAACTCGATGTTGATGAGCTTCATTTATTTTTTGCTTTACTATTAAATCCCTTGCTCCGGCGTCCTCTGGCAAGTGATGTGACCAACACTCAGTTTGCTATTCCTTTTGAGAAAGATATAGAACCTCGTTCCTCAGTTCTGGTGAAATGTTCAGACACAGTGGCCCTAGGTAATTTTTCATGGAAGAAGAGTTATGGATTCTTGCATGTTGTTGAAGATATACTGAGAACTTTTGATGAATTTCACATAAGGCCGTTTCTTAACCTGTTGATGAGGGTTGTTGCTCGGATACTTGAAAGTTGCATGTTGAGCCTCACTAGTGACTCAAAAGTCCATGATACAGATATTCCGCTGCTGTCAGCCAACATGGTGAGTACATCTAATAAGCAGTACAAGGAGTTGCGATCTTTATGCCTGAAGATCATCTCTTTTGCTCTCAATAAGTATGATAGTCATGACTTCGGTTCCGACTTTTGGGACACATTTTTCAATTCAGTGAAACCTCTAACTGACAGCTTCAAGCAGGAGGCTGCCAGTAGTGAAAAAGCAAGCTCTCTTTTTTCATGTTTTCTTGCTATGAGTAGCAGCCGAACATTAGTCTCACTTTTAGATCGGGAAGCAAAGTTGATTCCTAAGATTTTTTCAATCCTCACTGTGAGGACTGCCTCTGATGATATCATATCTTCTGTGCTTAATTTTGTTGAAAATTTGTTAATCTTGGATAATGAGTCTAATGATCAAGAGGAAAATCCAGTAAAAGGAGTCTTGTTACCTCACCTTGCAGTGCTAATTGACTGTTTTCATGGGCTTCTTCAATCCCATAAAGAGATCAGCAGGAAATCTCCCATGTCGTCTGGAAAGACAGAGCTGAGAATATTTAAACTGCTAGTGAAGTATGTAAATGATCCTGTGGTAGCAGAGAAATTTGTGGACATACTACTACCAATTTTCAAAAAGAAAGCTTTAAATTCTGATGAGTGTTTGGATGGTTTACATATCATAAGGCAGATTCTACCTGTGCTGAGTGATAAAACAACTGGAAAAATTCTCAGTGCAGTTAATCCGCTCCTTGTTTATTGTGGTTTGAACATGCGATTGTGCATTTGTGATATTCTTGACGGCCTTTCTTTGATTGATCCATCTTTGGCATTTCTGGCTAGGCTTCTTCGTGAATTGAATGCTGTGTCTTATTTGGAGATAAACGAGCTTGACTATGACACAAGAATATCTGCTTATAATTCAATAAGGCCAGATATCTTCTCTTCATTCATGGAGGAACATGCTTTAACTGTACTATCTCATTGCATATATGACATGTCCTCTGAAGAACTGATTCTACGGCAAAGTGCCTCTAAGTCATTGCTGTCCTTCATACGATTTGCGGCATCAATATTAGATAGCAATGGAGAGGATTGCGAAGAGAGGTCCCCTGGTGAATTACTTGAAGGCAAAACATACCCAATTCTTGAAATAACTAATACCAATTTTACTTGGACGAAAGCCTGCATTCAGCGTATAGTTAAGAAAACTTTCCTGCAGAATATTGGTGATGCTATGTCCAAGGATATCTCAATTCAGAAAGAATGGATTGATCTTTTTCGAGATATGGTTTATTATCTTCAACAAATCCCAGCTTTAAACTCTTTCAGAAGTTTGTGCAGTGAGGATCCTGAAGTGGACTTTTTTAGTAACATTGTTCACTTGCAGACACATAGAAGAGGAAGGGCGCTATCACGATTTAGAAGTGCAATCAGTGCTGGAAGCTTGCCAGAGAATATTACCATCAAGATTTTTGTTCCTCTATTTTTCAACATGATGCTTGATGTGAAGGCCGGGAAAGGGGAGCACTTAAGAAATGCATGCTTGACAACTCTGGCTTCAATATCAGGTCAAATGCATTGGGAAAACTATCGTGTATTTTTAATGAGATGCTTCAAGGAAATGAAGTTCAAGCCAGACAAAGGGAAAATCATGATACGCCTGATATGTGAAGTGTTGGACATGTTCCATTTTTTTGGTGCCAACTCCAGTTTACATGCTAAAGACGGTAGAAAAGAGGATGTTAATAATGAGAGTACTGAAGATAATTTAAGTGTTGCATTGGTTTCTTGTCCAGAATCAAATGTTCCGTTGGAAATACAAGACTGCTTGCAGAAGGTAGTCTTTCCAAAACTTACGAAGTTGCTGAAATCAGACTCTGAGAAAGTCAATGTTAACTTTAGTCTTGCTGCCTTAAAATTGCTCAAGTTGCTCCCGAAGGAAACTATGGAAGCACAACTACCAAGTATCCTTCATCGCATTTGTAACTTTTTAAAGAATCGACTAGAAAGCATACGTGATGAAGCAAGATCTGCTTTGGCTGCTTGTGCTAAGGAGTTGGGGATGGAAGGATTTTACTTGATAGTTAAGGTTTTGAAAGCAACACTAAAGAGGGGTTTTGAGTTGCATGTTTTGGGATACACCCTCAATTTCATATTATCTAAAATGCTTGAAAAATCCTCTGTTGGGAAACTCGATTATTGTTTGGAAGAGCTTCTATCGATTGCTGAAAATGACATTCTTGGACATGTTGCAGAGGAGAAAGAAGTTGGTAAAATTGCTTCAAAAATGAAAGAAACCAGGAAAAGAAAATCCTTTGAAACCCTGAAGCTGATATCGCAAAGTATTACTTTCAGGACACATGCTCTGAAGTTGCTTTCCCCCATCAAGGAACATCTTCAGAAACACCTCACGCCAGGAGCAAAGTCAAAACTTGAACAAATGCTCTCTCATATTGCTCTAGGAATTGAGTGCAACCCATCTACAAAACCAGATGAGTTGTTTATCTTTGTGTATGGGCTCATCGAAGATGGTATCGCAGGTTCTGGTTGTCACAATGGATCTGAAAACTTAACGAATAAAACATCCATCCAAGAATTATCAGATAAAAGGAATACCTTGAGTCCCAAAAGGTCAAAGAATGATCATCTTATCGTTGATTTTGCCCTTGGAGTATTAAATAACCGTTTGAAGAATATGAAGTTGGACAAGAATGATAAGCAATTATTATCAATGTTGGATCCCTTTATTGTACTGCTTGGGAACTGCTTGAATTCCAAATATGAAAACATATTGTCTAGTGCTTTTAGATGCCTGGCTCCACTAATCAAGCTTCCTCTACCTTCCTTGGAAGCACAGGCTGATAACATCAAGATTTTACTTCTAGATTTTGCTCAGAAATCTTCAAATGCTACCAATCCACTCGTACAATCTTGTCTAAAGTTGCTTACTGTTTTACTACGAAGCACTAGGATATCACTCTCACAAGATCAGCTCCACATTCTTATTCAGTTTCCTATGTTCCTTGATCTTATGGCTGACCCATCCCCGGTTGCACTTTCACTTTTGAAGTCTATAGTTGGCCGGAAGCTGGTAGCCCATGAAATCTATGATGTTATTTTACGGGTTGCTGAAGTAATGGTAACAAGCCAGTCAGAGCCAATCCGCAGGAAATGTAGCAAAATTCTACTACAGTTCCTTCTGGATTATCAACTTTCTGATAAACGCTTGCAGCAACATATGGATTTCTTACTCACTAATCTGAATTATGAACATTCATCAGGAAGAGAATCTGTGCTTGAAATGCTTCATGCTGTTCTTATGAAATTTCCTAGAAATGTTATAGATAATCAGGCTCAGACATTCTTCCTCCATTTAGTTGTTGCTTTAGCTAATGAACGTGAGCAGAAAGTCCGATCAATGGTTTCGACTGTTATAAGAGAACTGATTGCCCACACAAGCTCCAATGCACTAAATTTAATTTTAGATTACAGCCTTTCATGGTATATGGGTGAAAAACAGCATCTATGGAGTGCTGCAGCACAGGTTCTGGGTTTATTGGTTGAAGTACTGAAGAAGGGATTTCAGAAACATATACCTTCTGTACTACAAGTTGCAAGAAACATTTTCACATTGTCCATTAATGCCAGTAGCATTAAAGGGTTCAACTTCTCAAAGGAACCTGCAATCCCATTCTGGAAAGAGGCTTACTACTCACTTGTTATGTTGGAGGCAATTTTGCTGCCCTTCCCTCAGTTGTATTTTGACAGTGACCTTGAGGATATCTGGGAAATGATTCTCAAGTTCTTGCTACATCCTCATGTATGGTTGCGGAACATTTCCAATCGGCTGGTGGCGTTAAATTTTTCTGCTGTATCTGCTGTATCGGAGGCTGGTAGGGTTATACATGACAATTTGGACCAAGGAGCTTCTTATCTTGCTAATCCAAGCAGGCTTTGTTTGATATCTGCTTCGCTTCTGAACCAGCTGAAGACACAAATCTCTGACGACGGTGCAATAATAAATATCATTACTCAGAATTTTGCATTCTCAATTTGCCATTTGCATAGTTTTACAAAAAAGAGAGCTAATTTGGTTCCACATGAGTTTTGGTCTTCTCTTGGTCAACGCGATCAAACTTCGTATCTTGAGGCATTTCAATTGCTTGGATCCAGTAAGGCAAAGGACATCTTTATGCTGGCAACAATTGACACTAGTCAGGCTCCTAAGGAGGCAGATCATTCTGACGAATACAGCACCAAGAACCTTCAATCTTTGTTAGTTGCACCTTTACTCAAGAGGATGGGAAAAATCGCAATGGAAATGGAGGATATACAGATGAAGGTTGTTTTTAATTGCTTCAGACTGATATCATCACAAATGGGTTCTGAAGGTTGCAAAGACTATGCCTTTTACCTGCTTATTCCTCTATATAAAGCATGTGAAGGATTCATGGGAAAGATTGTTAGTGATGATATCAAACAGCTGGCAGAAGATGTCCGAGGCAATGTAAGGGACATAATAGGGGTGGACAATTTTGTTCGAGTTTACAATGAAATCAGAAAGAAACTCAAGGGGAAGAGGGACAAGAGGAAGTATGACCAGAAGCTTCTTGCTGTTGTCAATCCTATGAGACATGCAAAGAGGAAGCTGAGACTTGCAGCTAAGCATCGCGCTCATAAGAAGAGGAAGATAACTGCCATGAAGATGATCAAATTGAGAAGATAG
Protein:  
MATSRLQSVKCLDTSSGPKRFTFKSISQRIKEIDINVYKSLDPLRSEPKSSSFFLDSLLYWRELNTAEDFISFYEEMMPLVQTMPQILFHKDKIFSELIRRVNMKAQLSLEPILMLIASLSRDILEEFLPFLQRLTDCVVNLLTNGGRYHPNILEQVFTSWQYIMMYLQKYLVKDVVDVLKITTRLRYFENDHVPDFMAEAVSFLLRNSSVMELKKGLRMIVLEVAESPSAIKKRGATALLFYVLKGTSSRLHSRAEKVFRWLIDKSFLSLSDESLEGLEAVLEVSSDVIKRLFKEVDPTEFGMVYKCLYEETSSSINDGCLMHLNRLLSLLTTTIYQSNNTQIYDSETLLELVRLLIRSYIVPVENMKSEEHFSQVLNGILELTLCLLDNPLISDDLSSISLDYAPVFRLKNSGLSFVNRLLLKNPCVVHAFRHHIISAMANLIEESPEVVLFSIIKFIEGQEKLQPFNSLAGIPSEEMLKLCNYFKKILFFWVKLLGRCTTDNSLSDAPVTISNVAVLWGVLSCYPHFQHLHDNVSPIIDLIVAFDQVLETEADNIAGIPKSTWQSLLGAALISYHKLLLVTKTGLSEISTFLRLAKRYKSSSQVLFAVAEFLDSFIGGISKSEAHASQNIRDLDTNEAVIATNIFSDNLSLPNKEIRMSTLRILSHYPPLGAPSATSYEPPHKKLKTEESGSCSELSPSSNVVDLLLLVEATPLSISSSRKIVNLISRLQKGLSSARVNHAYLPLVLNGLIGTLHNRLSYLWQPASECLAVLLGRYKDLVWNKFVQHLENYQLRFLSSSDELVKINSESPQEKNLVDCFKLFLAPDFDNTPCVTVINQFLKSLQEVHDLAESRSRQLIPLFLKFLGYADDSRSSVEAFSGHSCSGKQWRLVLKEWLNLLKSMRDVRSLYQSQFLKEVLSNRLLGEIDSDIQLKVLECLLNWKDEFLTPYGQHLKNLIISKNLREELAVWSASKDSQCIQECHRGPMIPILIRLLTPKVRNLKTLGSCKHTGVSHRRAVLCFLAQLDVDELHLFFALLLNPLLRRPLASDVTNTQFAIPFEKDIEPRSSVLVKCSDTVALGNFSWKKSYGFLHVVEDILRTFDEFHIRPFLNLLMRVVARILESCMLSLTSDSKVHDTDIPLLSANMVSTSNKQYKELRSLCLKIISFALNKYDSHDFGSDFWDTFFNSVKPLTDSFKQEAASSEKASSLFSCFLAMSSSRTLVSLLDREAKLIPKIFSILTVRTASDDIISSVLNFVENLLILDNESNDQEENPVKGVLLPHLAVLIDCFHGLLQSHKEISRKSPMSSGKTELRIFKLLVKYVNDPVVAEKFVDILLPIFKKKALNSDECLDGLHIIRQILPVLSDKTTGKILSAVNPLLVYCGLNMRLCICDILDGLSLIDPSLAFLARLLRELNAVSYLEINELDYDTRISAYNSIRPDIFSSFMEEHALTVLSHCIYDMSSEELILRQSASKSLLSFIRFAASILDSNGEDCEERSPGELLEGKTYPILEITNTNFTWTKACIQRIVKKTFLQNIGDAMSKDISIQKEWIDLFRDMVYYLQQIPALNSFRSLCSEDPEVDFFSNIVHLQTHRRGRALSRFRSAISAGSLPENITIKIFVPLFFNMMLDVKAGKGEHLRNACLTTLASISGQMHWENYRVFLMRCFKEMKFKPDKGKIMIRLICEVLDMFHFFGANSSLHAKDGRKEDVNNESTEDNLSVALVSCPESNVPLEIQDCLQKVVFPKLTKLLKSDSEKVNVNFSLAALKLLKLLPKETMEAQLPSILHRICNFLKNRLESIRDEARSALAACAKELGMEGFYLIVKVLKATLKRGFELHVLGYTLNFILSKMLEKSSVGKLDYCLEELLSIAENDILGHVAEEKEVGKIASKMKETRKRKSFETLKLISQSITFRTHALKLLSPIKEHLQKHLTPGAKSKLEQMLSHIALGIECNPSTKPDELFIFVYGLIEDGIAGSGCHNGSENLTNKTSIQELSDKRNTLSPKRSKNDHLIVDFALGVLNNRLKNMKLDKNDKQLLSMLDPFIVLLGNCLNSKYENILSSAFRCLAPLIKLPLPSLEAQADNIKILLLDFAQKSSNATNPLVQSCLKLLTVLLRSTRISLSQDQLHILIQFPMFLDLMADPSPVALSLLKSIVGRKLVAHEIYDVILRVAEVMVTSQSEPIRRKCSKILLQFLLDYQLSDKRLQQHMDFLLTNLNYEHSSGRESVLEMLHAVLMKFPRNVIDNQAQTFFLHLVVALANEREQKVRSMVSTVIRELIAHTSSNALNLILDYSLSWYMGEKQHLWSAAAQVLGLLVEVLKKGFQKHIPSVLQVARNIFTLSINASSIKGFNFSKEPAIPFWKEAYYSLVMLEAILLPFPQLYFDSDLEDIWEMILKFLLHPHVWLRNISNRLVALNFSAVSAVSEAGRVIHDNLDQGASYLANPSRLCLISASLLNQLKTQISDDGAIINIITQNFAFSICHLHSFTKKRANLVPHEFWSSLGQRDQTSYLEAFQLLGSSKAKDIFMLATIDTSQAPKEADHSDEYSTKNLQSLLVAPLLKRMGKIAMEMEDIQMKVVFNCFRLISSQMGSEGCKDYAFYLLIPLYKACEGFMGKIVSDDIKQLAEDVRGNVRDIIGVDNFVRVYNEIRKKLKGKRDKRKYDQKLLAVVNPMRHAKRKLRLAAKHRAHKKRKITAMKMIKLRR